Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803591.1_cds_XP_016485009.1_7579
CDS Infomation

[gene=LOC107805468] [db_xref=GeneID:107805468] [protein=beta-amylase 1, chloroplastic-like] [protein_id=XP_016485009.1] [location=join(17497..18023,20503..20713,20789..20905,20997..21788)] [gbkey=CDS]
Sequence

ATGGCGATCACTTCGCCATCGGCTCCGACTTTCTCGGCGTCTCTCTGCTGCACTCGCACT
GACTCAGCCGCTGTTCCAGCTCGTTCACTCAAATCCTCGCCGATCCAAACTAGGTTCCAG
AATCGCCGATTCACGTTATCCTGTCGGCTTGATTCATCTTCCTCCGTACCTTCTAATGGC
TTCGACGGCGATCTTCAGTACGAACTTCAGCATGGAAGCGTTTCGACTCACTATCGCCGG
CGAGGTTCACCGGTGTTCGTCACGCTTCCGGTTGATGCCGTCAGCTTACCGGCAGGGATT
ATGAAGAGGAAGAAGGCGATGGCGCAGTCGTTTCGTGCTTTGGCGGCGGCGGGAGTTGAA
GGAGTTGTGATGGAGGTGTGGTGGGGGCTGGTGGAGAGGGAATTGCCCAGGGTTTATAAT
TGGCAAGGGTATTTGGAGATTGTGGTTTTGGCTAGACGATGTGGTTTGAAAGTTCGAGCT
GTAATGGCTTTTCATCAGTGCGGTACTGGGCCTGATGATCCCTTCTGGATTCCCCTTCCT
CTGTGGGTTTCTGAAGAAATGGATAAAGATCCAGATTTAGCATATTCAGACAGGTTTGGG
CGACGAAATATGGAATATATATCCCTAGGGTGTGATGTTCTTCCCGTTCTGCACGGACGA
TCTCCAATCCAAGCATATGCTGAATTTATGAGGAGCTTCCGTGACACCTTCAGACCATTT
CTTGGTGGTGTCATAACTGGTATCCAAGTTGGAATGGGTCCTGCTGGTGAGTTAAGATAT
CCTTCATGCCCTTTACAGAAGCTGAGCTGGACATGGCGCTCACGCGAACTTGGCGAATTT
CAATGCTATGACAAGTATATGCTTGCATCTTTAAATGCTTGTGCTGGGGAGAGAGGGATG
CGTGAGTGGGCCAATGGCGGCCCTATTGGTGCCAGTAATTTAATGCAGGATCCTGAAAGC
ACAGATTTCTTCAAAAGTGACGGTTCTTGGAACACACCATATGGAGAGTTCTTCCTTGCA
TGGTATTCAGAGATGTTGCTGCTTCATGGTGAGAGGATTTGCAGGGAAGCAGAGACCACA
TTTCGTGGTCTTGAAGTTAATTTGACAGGCAAAGTGGCTGGGATTCACTGGCATTATGGT
ACACGGTCTCACCCGTCAGAGCTAACAGCTGGCTACTACAATACATCAATTCGAGATGGT
TTCCTGCCAATTGCTCGCATGTTTGGTAGGTACGGTTTTACCATGTGTTGTACATGTTTC
GAAATGCGGGATGCAGAAGAGCAGCAGATGAATCCTGTCAGTGGTCCCGAAGGTTTTGTA
AAACAACTTTTGCTTGCTGCTAGGATATGTGACATTCCCCTGCAAGGTGAAAACACTGCA
AGTAGCTTGGATGACGAATCATATCAACAGGTGTTAAGGATGTCTAAGTTCTATTCGGAT
GGTCCAGGAACACCTACCTTTTCATTCAATTTTGTCAGAATGGACAAGAACTTGTTTGAA
TATCGGAATTGGGTTAGCTTTACTCGTTTTGTGAGACTAATGGCAGATGTCAAAATTTTT
CGAGCCAAGCTAGGATTTGGGGAAGGTGATATGCCGCTTTCATCTTTATCAGCATCCGCC
ACTGCTGGAGCAGTTCTTGCATACTAG

Peptide Sequence

PEP ID

XP_016485009.1
PEP Infomation

PREDICTED: beta-amylase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAITSPSAPTFSASLCCTRTDSAAVPARSLKSSPIQTRFQNRRFTLSCRLDSSSSVPSNG
FDGDLQYELQHGSVSTHYRRRGSPVFVTLPVDAVSLPAGIMKRKKAMAQSFRALAAAGVE
GVVMEVWWGLVERELPRVYNWQGYLEIVVLARRCGLKVRAVMAFHQCGTGPDDPFWIPLP
LWVSEEMDKDPDLAYSDRFGRRNMEYISLGCDVLPVLHGRSPIQAYAEFMRSFRDTFRPF
LGGVITGIQVGMGPAGELRYPSCPLQKLSWTWRSRELGEFQCYDKYMLASLNACAGERGM
REWANGGPIGASNLMQDPESTDFFKSDGSWNTPYGEFFLAWYSEMLLLHGERICREAETT
FRGLEVNLTGKVAGIHWHYGTRSHPSELTAGYYNTSIRDGFLPIARMFGRYGFTMCCTCF
EMRDAEEQQMNPVSGPEGFVKQLLLAARICDIPLQGENTASSLDDESYQQVLRMSKFYSD
GPGTPTFSFNFVRMDKNLFEYRNWVSFTRFVRLMADVKIFRAKLGFGEGDMPLSSLSASA
TAGAVLAY

Transcript Sequence

Gene sequence data has not been registered.